{"id":"W6889708177","doi":"10.26181/19801228.v1","title":"GWAS and genomic prediction of milk urea nitrogen in Australian and New Zealand dairy cattle","year":2022,"lang":"en","type":"article","venue":"La Trobe University","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agriculture Victoria; Gardiner Foundation; University of Alberta","keywords":"Genome-wide association study; Quantitative trait locus; Dairy cattle; Genetic association; Trait; Whole genome sequencing; Urea nitrogen","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004665729,0.00005335416,0.00006556542,0.00003153418,0.0000493634,0.000002320284,0.00006637411,0.00004608027,0.00002273017],"category_scores_gemma":[0.000002811332,0.00006407912,0.00001605894,0.00003852733,0.00005668456,0.000002101983,0.0001183227,0.0000626899,1.759851e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001241143,"about_ca_system_score_gemma":0.00003992477,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003667054,"about_ca_topic_score_gemma":0.00007319744,"domain_scores_codex":[0.9996398,0.00004815627,0.00005315684,0.0001427801,0.00003805778,0.00007801353],"domain_scores_gemma":[0.9998263,0.000006120316,0.00002726149,0.00008545782,0.000005787995,0.00004913383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004197114,0.0001038886,0.90997,0.00002746619,0.00008065011,0.000004529824,0.00146427,0.001791476,0.07478263,0.001601318,0.007806551,0.001947492],"study_design_scores_gemma":[0.001352359,0.0003154001,0.9377531,0.000003138327,0.00003192096,0.00002497371,0.0006065979,0.000008238098,0.001799043,0.0009635832,0.05705291,0.0000887767],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989414,0.0001689949,0.0001082255,0.00008017645,0.00003011208,0.00006706371,0.00008508773,0.000003111931,0.0005158524],"genre_scores_gemma":[0.9959913,0.0000400582,0.001376735,0.00001459081,0.00002194465,2.847285e-7,0.00004437246,0.000003897205,0.00250679],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07298359,"threshold_uncertainty_score":0.2613071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009136431221703552,"score_gpt":0.1860806707908389,"score_spread":0.1769442395691354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}