{"id":"W6889708177","doi":"10.26181/19801228.v1","title":"GWAS and genomic prediction of milk urea nitrogen in Australian and New Zealand dairy cattle","year":2022,"lang":"en","type":"article","venue":"La Trobe University","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Agriculture Victoria; Gardiner Foundation; University of Alberta","keywords":"Genome-wide association study; Quantitative trait locus; Dairy cattle; Genetic association; Trait; Whole genome sequencing; Urea nitrogen","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001934676,0.000464503,0.0006137245,0.0009448778,0.000577169,0.0007406909,0.0005567038,0.0004869711,0.001467588],"category_scores_gemma":[0.00314406,0.0002491356,0.001105465,0.002212053,0.0004030579,0.0002386516,0.0006502192,0.0005509754,0.0001153825],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006394007,"about_ca_system_score_gemma":0.0005664944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.06784429,"about_ca_topic_score_gemma":0.07605499,"domain_scores_codex":[0.9991891,0.0002345897,0.00006386112,0.0003037149,0.0001466314,0.00006219572],"domain_scores_gemma":[0.9988605,0.0004917257,0.0002754377,0.0001312708,0.0001433784,0.00009779156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008247306,0.00004280237,0.9749151,0.0001366256,0.003131815,0.0005530186,0.0003724067,0.001497239,0.007159358,0.0001690667,0.0003978588,0.01080008],"study_design_scores_gemma":[0.00003602796,0.00005055497,0.9964027,0.00001656094,0.0006601436,0.0001520689,0.00009579258,0.001846531,0.0001616319,0.00008436052,0.0004875244,0.000006119535],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971699,0.0009364595,0.0007224617,0.0001209783,0.000007739005,0.000009340623,0.0007125475,0.00001602141,0.0003045992],"genre_scores_gemma":[0.9972091,0.0003887308,0.001324593,0.00006236292,0.000008292748,0.00001898414,0.0006934205,0.000009619958,0.0002848673],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06784429,"threshold_uncertainty_score":0.1348988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009136431221703552,"score_gpt":0.1860806707908389,"score_spread":0.1769442395691354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}