{"id":"W6893922931","doi":"10.5281/zenodo.5256008","title":"Unveiling the Patterns of Reticulated Evolutionary Processes with Phylogenomics: Hybridization and Polyploidy in the genus Rosa","year":2021,"lang":"en","type":"other","venue":"Open MIND","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Reticulate evolution; Reticulate; Phylogenetic tree; Polyploid; Phylogenetics; Taxon; Genus; Nuclear gene; Taxonomic rank","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001357874,0.0004886788,0.000639359,0.001863906,0.0006236358,0.000831802,0.0005571399,0.0006844159,0.0005717553],"category_scores_gemma":[0.001604864,0.0003631638,0.0006480112,0.001553275,0.0006168143,0.001398634,0.0009879562,0.001207178,0.0002336488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004299638,"about_ca_system_score_gemma":0.0002442156,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008025083,"about_ca_topic_score_gemma":0.001453783,"domain_scores_codex":[0.9995885,0.0001120269,0.0000304877,0.0001864171,0.00003849727,0.00004403093],"domain_scores_gemma":[0.9990525,0.0004164181,0.0002802085,0.00009525171,0.00007550986,0.00008006676],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003416597,0.00009271052,0.1077975,0.0005948649,0.0003156073,0.0005217681,0.002835867,0.005757373,0.8311621,0.002422194,0.0001393976,0.04801892],"study_design_scores_gemma":[0.00003754212,0.0003638646,0.8274338,0.0002418949,0.0005585515,0.001151474,0.002343246,0.09381253,0.0523102,0.01297608,0.008573004,0.0001978345],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9543112,0.002334965,0.04158413,0.0002478384,0.00001288207,0.00002868454,0.0004420549,0.0001786656,0.0008595748],"genre_scores_gemma":[0.9679808,0.0006259538,0.03026735,0.0001039095,0.00001228653,0.00003049996,0.0007155329,0.0001062395,0.0001575425],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001863906,"threshold_uncertainty_score":0.007181168,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02285381366842845,"score_gpt":0.2643386767841114,"score_spread":0.241484863115683,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}