{"id":"W6901541530","doi":"10.60692/p11ft-qq684","title":"Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm","year":2020,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Helminth infection and control","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Caenorhabditis elegans; Genome; Haemonchus contortus; Genomics; Transcriptome; Model organism; Gene; Nematode; Sequence assembly","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005565055,0.0001298915,0.00007986348,0.0003644016,0.0001385509,0.0001890588,0.00007717811,0.000138374,0.00120598],"category_scores_gemma":[0.0001534203,0.0001071653,0.0001177006,0.00020541,0.0001255513,0.0000764988,0.0001600636,0.0001939447,0.0002658721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001649074,"about_ca_system_score_gemma":0.00009801254,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001579547,"about_ca_topic_score_gemma":0.004758349,"domain_scores_codex":[0.999952,0.000004047395,0.000002540042,0.00002025063,0.00001326074,0.000008001234],"domain_scores_gemma":[0.9999155,0.00002153919,0.00002671836,0.000008337829,0.00001286049,0.00001507615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004536141,0.000005218038,0.002233378,0.00001431962,0.000005562884,0.00003302962,0.00003440944,0.00006939611,0.9964055,0.0000472939,0.00003273191,0.001073811],"study_design_scores_gemma":[0.0000144324,0.0002040151,0.802321,0.00001778607,0.00005223849,0.0005443409,0.000210909,0.00265281,0.1892198,0.0002161879,0.004536347,0.0000102152],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948611,0.0001250889,0.002138125,0.00002669977,0.000004246539,0.00001048156,0.001857878,0.00004398011,0.0009324127],"genre_scores_gemma":[0.9890717,0.0001128041,0.003279593,0.00003992781,0.000004253276,0.00002445529,0.005639195,0.00005654197,0.001771577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001579547,"threshold_uncertainty_score":0.0040344,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05589623304149468,"score_gpt":0.2301157976975733,"score_spread":0.1742195646560786,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}