{"id":"W6902081104","doi":"10.6084/m9.figshare.13250654.v1","title":"Additional file 1 of MADA: a web service for analysing DNA methylation array data","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Geology and Paleoclimatology Research","field":"Earth and Planetary Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"DNA methylation; Web service; Service (business); File format; Methylation; Differential (mechanical device); Table (database)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002042537,0.001479906,0.001620152,0.003149618,0.001063796,0.002017538,0.002731703,0.001426501,0.8306906],"category_scores_gemma":[0.01549071,0.001048497,0.001111118,0.004162752,0.0003984168,0.001846981,0.001701344,0.001496776,0.3441522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001145497,"about_ca_system_score_gemma":0.001774216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005080543,"about_ca_topic_score_gemma":0.01000258,"domain_scores_codex":[0.9989837,0.0001625877,0.0001157692,0.0003007876,0.0003032284,0.0001339858],"domain_scores_gemma":[0.9886938,0.008208942,0.0005589095,0.0007978714,0.001290135,0.0004503876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002707395,0.00006641682,0.001282559,0.001991149,0.0000522288,0.00006048128,0.00006430964,0.000408274,0.001029124,0.0007000646,0.9841793,0.009895437],"study_design_scores_gemma":[0.00111038,0.0001422726,0.01110218,0.0007624617,0.0001617471,0.0003195061,0.0001887074,0.001667,0.004800961,0.006833402,0.9727573,0.0001541618],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0001573348,0.0000307546,0.00129791,0.00007274808,0.00003950785,0.00006264862,0.9944623,0.0025882,0.00128852],"genre_scores_gemma":[0.004344306,0.0001267075,0.01015647,0.0005810392,0.00008624211,0.001177915,0.9677489,0.006193288,0.009585077],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8306906,"threshold_uncertainty_score":0.2414992,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1436009665314868,"score_gpt":0.2846801823333141,"score_spread":0.1410792158018273,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}