{"id":"W6902135570","doi":"10.6084/m9.figshare.23537653","title":"Additional file 1 of Expanding the application of haplotype-based genomic predictions to the wild: A case of antibody response against Teladorsagia circumcincta in Soay sheep","year":2023,"lang":"en","type":"article","venue":"Open MIND","topic":"Helminth infection and control","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"London Health Sciences Centre; Dalhousie University","funders":"","keywords":"Teladorsagia circumcincta; Antibody response; Antibody; Selection (genetic algorithm); Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001388558,0.0006617075,0.0005997616,0.001662446,0.0008084752,0.00114448,0.001531914,0.001178585,0.7873469],"category_scores_gemma":[0.02921064,0.0003586985,0.0006256412,0.001849044,0.0002472803,0.001054533,0.0008606944,0.0007727289,0.1010754],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006215673,"about_ca_system_score_gemma":0.001164826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01206889,"about_ca_topic_score_gemma":0.02069087,"domain_scores_codex":[0.9995117,0.00009277814,0.00007703529,0.0001276823,0.0001221168,0.00006858217],"domain_scores_gemma":[0.9817547,0.01479685,0.0007238293,0.0008916359,0.001438542,0.0003943234],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003076271,0.00009532897,0.006781652,0.001288521,0.00004240202,0.0004303814,0.0001401021,0.0007610663,0.0002280449,0.0007753972,0.9758472,0.01330231],"study_design_scores_gemma":[0.004610355,0.0003717589,0.06829166,0.004014889,0.0003286526,0.003188083,0.001460346,0.006448201,0.002194305,0.0207925,0.888078,0.0002212922],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0004776791,0.00001460922,0.0005105723,0.0002007947,0.00003266306,0.00005324585,0.9969642,0.0003177204,0.001428505],"genre_scores_gemma":[0.02532122,0.0001820477,0.007847914,0.0007182006,0.0001569758,0.001024685,0.9524197,0.0009576155,0.0113716],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.7873469,"threshold_uncertainty_score":0.3033238,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04481651745895566,"score_gpt":0.3535582851985088,"score_spread":0.3087417677395531,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}