{"id":"W6902175619","doi":"10.6084/m9.figshare.29510554.v1","title":"Additional file 1 of A minimized symbiotic gene set from the 1.68 Mb pSymB chromid of Sinorhizobium meliloti reveals auxiliary symbiotic loci","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; McMaster University","funders":"","keywords":"Sinorhizobium meliloti; Gene; Table (database); Set (abstract data type); Sinorhizobium; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007627,0.001553796,0.001997685,0.002170324,0.00152234,0.001381798,0.002412481,0.00113542,0.7068806],"category_scores_gemma":[0.005167413,0.0009492791,0.001072274,0.003494135,0.0003428027,0.001472056,0.001093319,0.001543699,0.1535278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009560407,"about_ca_system_score_gemma":0.00148666,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005569775,"about_ca_topic_score_gemma":0.01164137,"domain_scores_codex":[0.9995994,0.00003523863,0.00004138747,0.0001448929,0.0001071382,0.00007197413],"domain_scores_gemma":[0.9970079,0.00199599,0.0001964143,0.0002654593,0.0003241167,0.000210036],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001136538,0.0002340965,0.003584,0.00607807,0.0001387593,0.0002952452,0.0001889618,0.0009279674,0.00779781,0.001434185,0.9642294,0.013955],"study_design_scores_gemma":[0.006507399,0.0006855563,0.06629911,0.002099548,0.0004263192,0.001445404,0.0004878483,0.004345371,0.01615066,0.00865933,0.8925389,0.0003545976],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0003632178,0.00002221664,0.0005258482,0.00003329043,0.00002404238,0.00002602014,0.9974276,0.0009327441,0.0006449771],"genre_scores_gemma":[0.004303758,0.00006354733,0.003088307,0.0001310814,0.00003228611,0.000249538,0.988512,0.00149584,0.00212356],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.7068806,"threshold_uncertainty_score":0.4180993,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02056260909512408,"score_gpt":0.2152186489836202,"score_spread":0.1946560398884961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}