{"id":"W6902191915","doi":"10.6084/m9.figshare.24406751","title":"Additional file 1 of Exploring the alternative virulence determinants PB2 S155N and PA S49Y/D347G that promote mammalian adaptation of the H9N2 avian influenza virus in mice","year":2023,"lang":"en","type":"article","venue":"Open MIND","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Virulence; Influenza A virus subtype H5N1; Virus; Adaptation (eye); H5N1 genetic structure; Influenza A virus; Avian influenza virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001576294,0.000889134,0.001228572,0.001668415,0.001166954,0.001188459,0.001766908,0.001022085,0.8948412],"category_scores_gemma":[0.01915275,0.0006052649,0.0007221063,0.002635574,0.0003176953,0.001171397,0.0007956204,0.0009542456,0.1784738],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008377682,"about_ca_system_score_gemma":0.001671812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005998029,"about_ca_topic_score_gemma":0.01128619,"domain_scores_codex":[0.9994262,0.0001045812,0.00007617182,0.0001355381,0.0001750693,0.00008251704],"domain_scores_gemma":[0.9878169,0.0092981,0.0005770398,0.0006581109,0.001250972,0.0003989551],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000677417,0.0002987079,0.002398517,0.003571203,0.00004565221,0.0001342319,0.000124606,0.0005033147,0.0007597499,0.001012637,0.9742678,0.01620606],"study_design_scores_gemma":[0.008052901,0.001060012,0.0317251,0.004006623,0.0003060289,0.001063662,0.0007813124,0.002776996,0.004727817,0.01216849,0.93309,0.0002410038],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0003677662,0.00003120974,0.0006478584,0.0001201147,0.00003828502,0.000182393,0.9965341,0.000385492,0.001692748],"genre_scores_gemma":[0.01435109,0.0002954309,0.008632744,0.0007562857,0.0001080843,0.004197124,0.9500821,0.001224764,0.02035238],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8948412,"threshold_uncertainty_score":0.1499962,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.252748637250002,"score_gpt":0.3922109277730534,"score_spread":0.1394622905230514,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}