{"id":"W6902293604","doi":"10.6084/m9.figshare.26557955","title":"Additional file 1 of Prevalence of pks + bacteria and enterotoxigenic Bacteroides fragilis in patients with colorectal cancer","year":2024,"lang":"en","type":"article","venue":"Open MIND","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Bacteroides fragilis; Colorectal cancer; Bacteria; Bacteroidaceae; Anaerobic bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008580764,0.0007579485,0.001103848,0.001667369,0.000763161,0.0009518793,0.001164503,0.0009078472,0.722586],"category_scores_gemma":[0.02022437,0.0003585593,0.000673213,0.003116568,0.0001762799,0.001192982,0.0006568613,0.0007999117,0.05086176],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007112937,"about_ca_system_score_gemma":0.001196038,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008109183,"about_ca_topic_score_gemma":0.009430635,"domain_scores_codex":[0.9994697,0.00009609183,0.0001148553,0.0001505385,0.00008272612,0.00008609296],"domain_scores_gemma":[0.9895213,0.006890988,0.001370802,0.0006447718,0.001218889,0.0003532756],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007596319,0.0001828066,0.02013714,0.003475846,0.000128203,0.0001446035,0.0001215282,0.0004223987,0.0001069606,0.0007121621,0.9614016,0.01240713],"study_design_scores_gemma":[0.01134906,0.001288663,0.3467317,0.01219339,0.000851533,0.00335407,0.00173396,0.005250562,0.00123325,0.01595191,0.599704,0.0003580123],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.001048591,0.00004071898,0.0001469239,0.000114223,0.00001854081,0.00008207368,0.9975369,0.0000594103,0.0009525177],"genre_scores_gemma":[0.05445657,0.0004443674,0.002827615,0.0009535261,0.000267823,0.004116294,0.9211352,0.0003114523,0.0154871],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.722586,"threshold_uncertainty_score":0.3956974,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01092943971664,"score_gpt":0.2555585178865807,"score_spread":0.2446290781699407,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}