{"id":"W6903113640","doi":"10.1021/bi101808h.s001","title":"Mechanistic Evaluation of &lt;i&gt;MelA&lt;/i&gt; α-Galactosidase from &lt;i&gt;Citrobacter freundii&lt;/i&gt;: A Family 4 Glycosyl Hydrolase in Which Oxidation Is Rate-Limiting","year":2016,"lang":"en","type":"article","venue":"Figshare","topic":"Enzyme Catalysis and Immobilization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Hydrolase; Kinetic isotope effect; Glycosyl; Hydrolysis; Deuterium; Glycoside hydrolase; Leaving group; Enzyme; Substrate (aquarium); Glycal","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007008756,0.0004985126,0.0004972882,0.0002435699,0.0001403402,0.00009700494,0.0004627222,0.0005638404,0.01080456],"category_scores_gemma":[0.003872568,0.0004476933,0.000233044,0.0005232414,0.00002978617,0.0001027448,0.0002477415,0.0001407829,0.000454267],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001987393,"about_ca_system_score_gemma":0.0003710856,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008375031,"about_ca_topic_score_gemma":0.000548355,"domain_scores_codex":[0.9962675,0.0004661135,0.0009180038,0.001079545,0.0007104675,0.000558359],"domain_scores_gemma":[0.996726,0.0001798399,0.0006699126,0.001030428,0.001206653,0.0001872115],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001178461,0.0001564632,0.00009955278,0.00007866444,0.00009757454,0.000003233279,0.0001077145,0.0001182138,0.9843262,0.00004653567,0.01307418,0.001773773],"study_design_scores_gemma":[0.002849337,0.0002791185,0.01308259,0.001279392,0.0002353181,0.000004273606,0.00001728122,0.005564525,0.9416993,0.0001881624,0.03407164,0.0007290583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9581547,0.001581032,0.0007129994,0.0001174367,0.0001466112,0.0008888038,0.03732572,0.00004645687,0.001026274],"genre_scores_gemma":[0.8848772,0.0001351811,0.0001376877,0.0002068164,0.0002727444,0.0003684816,0.1136139,0.00008202179,0.0003059234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07628819,"threshold_uncertainty_score":0.9997975,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02415744529624571,"score_gpt":0.2512519465966381,"score_spread":0.2270945013003924,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}