{"id":"W6907806480","doi":"10.24433/co.1327077.v1","title":"CoBE_SMuRF (Significantly Mutated Region Finder example)","year":2021,"lang":"en","type":"other","venue":"Code Ocean","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network","funders":"","keywords":"Code (set theory); Key (lock); Source code; Identification (biology); Capsule","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00115183,0.003734966,0.001702596,0.00313194,0.001643994,0.002148484,0.003220901,0.002842364,0.3467475],"category_scores_gemma":[0.005242558,0.001656361,0.002203375,0.001933125,0.0004746497,0.002412604,0.003083525,0.001386432,0.2532058],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001149897,"about_ca_system_score_gemma":0.001266808,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004897377,"about_ca_topic_score_gemma":0.007361803,"domain_scores_codex":[0.9992329,0.00007323668,0.00005495274,0.0002375438,0.0002813238,0.0001200576],"domain_scores_gemma":[0.9989341,0.0005150046,0.0001270099,0.0001597976,0.0001662187,0.00009783971],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003264817,0.000027139,0.0009004332,0.0010002,0.00004781731,0.0004698038,0.00008880207,0.0005398787,0.002986881,0.001139613,0.9734659,0.01900707],"study_design_scores_gemma":[0.0004808141,0.00007329183,0.004758255,0.0005888201,0.0001055774,0.001847696,0.0001057717,0.006233098,0.02554884,0.006642981,0.9534067,0.0002080728],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.004248623,0.001354988,0.04425913,0.0009833075,0.001050803,0.0002501607,0.4162186,0.4979866,0.03364789],"genre_scores_gemma":[0.03241467,0.001282356,0.0943849,0.001748535,0.0003191001,0.00107085,0.529126,0.3038687,0.03578485],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.3467475,"threshold_uncertainty_score":0.9317853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06396823756774354,"score_gpt":0.2762248340825249,"score_spread":0.2122565965147813,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}