{"id":"W6910980913","doi":"10.5061/dryad.fk472","title":"Data from: The Salmonella In Silico Typing Resource (SISTR): an open web-accessible tool for rapidly typing and subtyping draft Salmonella genome assemblies","year":2016,"lang":"en","type":"dataset","venue":"Data Archiving and Networked Services (DANS)","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Subtyping; In silico; Multilocus sequence typing; Typing; Genome; Salmonella; Serotype; Context (archaeology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001988619,0.002141987,0.00192175,0.004231306,0.001122826,0.002533789,0.002519496,0.002247755,0.1104348],"category_scores_gemma":[0.008277859,0.001141922,0.001304012,0.006016696,0.0004341247,0.00187532,0.003149069,0.002659983,0.07639784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008101094,"about_ca_system_score_gemma":0.002997968,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009589994,"about_ca_topic_score_gemma":0.01406656,"domain_scores_codex":[0.9982357,0.0002051902,0.0002930149,0.0004021382,0.0006579162,0.0002059743],"domain_scores_gemma":[0.9960561,0.001106275,0.0004822796,0.0006271262,0.001243094,0.0004851558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001119232,0.0002123321,0.007202408,0.006916844,0.0002383913,0.0004322504,0.0002384422,0.001296923,0.01119853,0.001098951,0.9398264,0.03021931],"study_design_scores_gemma":[0.0006448381,0.0001222534,0.0163944,0.0009278489,0.0001463439,0.0002445532,0.0001689097,0.002140539,0.008076577,0.002488242,0.9684974,0.0001480059],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.001007694,0.0002086672,0.00125543,0.0001483119,0.00006333854,0.00007411341,0.991684,0.003139345,0.00241917],"genre_scores_gemma":[0.001836984,0.0001485626,0.002875434,0.0001022116,0.00001016979,0.0001626649,0.9935372,0.0005424774,0.000784248],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.1104348,"threshold_uncertainty_score":0.3694412,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06458416699955412,"score_gpt":0.3252376216196561,"score_spread":0.260653454620102,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}