{"id":"W6912317890","doi":"10.5281/zenodo.16815811","title":"DEPRECATED_Matcher (Version 2) for Automated Task Alignment in the Genomic API for Model Evaluation (GAME)","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Python (programming language); Workflow; Task (project management); Process (computing); Graph; Core (optical fiber); Architecture; Ontology alignment","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002371791,0.002699825,0.001144219,0.001357221,0.0008421005,0.002793163,0.004254963,0.001510772,0.1190834],"category_scores_gemma":[0.006637943,0.001556808,0.00216945,0.00106212,0.0004994696,0.003151785,0.00469071,0.00263256,0.06454664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001627657,"about_ca_system_score_gemma":0.001906027,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009224968,"about_ca_topic_score_gemma":0.01041499,"domain_scores_codex":[0.9984864,0.0002418664,0.0001175986,0.0004511553,0.0005022339,0.0002008249],"domain_scores_gemma":[0.999036,0.000283947,0.00006629371,0.0003414052,0.0001942375,0.00007815287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008593316,0.0001751633,0.002881818,0.0008472216,0.0002721497,0.0002055658,0.0003479757,0.009745163,0.007480585,0.01859932,0.8549553,0.1036305],"study_design_scores_gemma":[0.0005995778,0.0002081092,0.004140055,0.0002894661,0.0001063176,0.0003458681,0.0002455269,0.2637445,0.03723453,0.05060513,0.6421877,0.0002932847],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002527275,0.000225519,0.2102329,0.0002147072,0.0002296696,0.0002424342,0.02597713,0.7503747,0.009975693],"genre_scores_gemma":[0.07198035,0.0004192161,0.4192826,0.00113256,0.0001004078,0.001978943,0.1826849,0.2892775,0.03314348],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.1190834,"threshold_uncertainty_score":0.3983738,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03450288535052127,"score_gpt":0.2927991912329317,"score_spread":0.2582963058824104,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}