{"id":"W6920600533","doi":"10.6084/m9.figshare.14379389.v1","title":"Additional file 4 of PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads","year":2021,"lang":"en","type":"dataset","venue":"Figshare","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Genome; DNA sequencing; DNA; Whole genome sequencing; Genomics; Base sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00239648,0.002650162,0.002913558,0.003444722,0.001726901,0.003222086,0.00408906,0.003196826,0.5416825],"category_scores_gemma":[0.01395364,0.001185933,0.001810687,0.005813322,0.0006672448,0.002261324,0.001848109,0.002359723,0.1794498],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001630586,"about_ca_system_score_gemma":0.003329058,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009956924,"about_ca_topic_score_gemma":0.01957855,"domain_scores_codex":[0.998683,0.0002012046,0.0001461034,0.0005435428,0.0002159633,0.0002101359],"domain_scores_gemma":[0.991273,0.006022549,0.0004747127,0.0008545946,0.001008424,0.0003667421],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003347951,0.00007984162,0.002179992,0.00555384,0.0001406915,0.00005962226,0.00006619905,0.001075001,0.000648051,0.0008451937,0.9848113,0.004205439],"study_design_scores_gemma":[0.002423208,0.0001554371,0.01160752,0.001838186,0.0003269724,0.0002406315,0.0001792923,0.001523411,0.001795774,0.008104469,0.9716519,0.0001531236],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00004475274,0.00002050573,0.00008780428,0.00002011679,0.000008623942,0.00001489564,0.99946,0.000179852,0.0001634198],"genre_scores_gemma":[0.0007615425,0.00004964546,0.0008656405,0.0001213936,0.00001218709,0.0002847025,0.996813,0.0003294428,0.0007623512],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.5416825,"threshold_uncertainty_score":0.6537343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03055352932998823,"score_gpt":0.2363588045826405,"score_spread":0.2058052752526523,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}