{"id":"W6920615775","doi":"10.60692/df71v-6ss84","title":"Prediction of Cacao (Theobroma cacao) Resistance to Moniliophthora spp. Diseases via Genome-Wide Association Analysis and Genomic Selection","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Cocoa and Sweet Potato Agronomy","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Germplasm; Selection (genetic algorithm); Single-nucleotide polymorphism; Trait; Population; Plant disease resistance; Genotype; Genetic association","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006484162,0.0003742704,0.0003432504,0.0009332804,0.000299935,0.0005325229,0.0003135076,0.0003061041,0.001017696],"category_scores_gemma":[0.001057765,0.0001130783,0.0004677936,0.0008740557,0.0001468287,0.0001120626,0.0002603328,0.0002694195,0.0001176059],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002709445,"about_ca_system_score_gemma":0.0002359142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007654283,"about_ca_topic_score_gemma":0.00988399,"domain_scores_codex":[0.9996952,0.00005610862,0.00002218131,0.0001660694,0.00003139491,0.00002915995],"domain_scores_gemma":[0.9995114,0.0002012626,0.0001382153,0.00003268424,0.00005956117,0.00005693077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001193028,0.0002438565,0.7799485,0.0001330079,0.0007901915,0.0009779381,0.0006914639,0.003691844,0.1665297,0.0003176754,0.0003595675,0.04512327],"study_design_scores_gemma":[0.00004385502,0.0001031576,0.9918678,0.000008323526,0.0002336679,0.0001410976,0.0001448632,0.004890357,0.001911198,0.00008453147,0.0005609702,0.00001021149],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979045,0.0001563197,0.001254993,0.00004681952,0.000003413023,0.00001255653,0.0003106402,0.00002599629,0.0002847131],"genre_scores_gemma":[0.9953668,0.0001009131,0.003602386,0.00004434703,0.000008591867,0.00001739466,0.0005679593,0.00001022358,0.0002815125],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007654283,"threshold_uncertainty_score":0.01521945,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01388732830293693,"score_gpt":0.1777704615016102,"score_spread":0.1638831331986732,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}