{"id":"W6920830733","doi":"10.6084/m9.figshare.22735539","title":"Additional file 1 of HostSeq: a Canadian whole genome sequencing and clinical data resource","year":2023,"lang":"en","type":"article","venue":"Open MIND","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Women's College Hospital; Queen's University; Ottawa Hospital; University Health Network; BC Children's Hospital; University of British Columbia; Alberta Children's Hospital; Jewish General Hospital; Canada's Michael Smith Genome Sciences Centre; University of Waterloo; Lunenfeld-Tanenbaum Research Institute; University of Calgary; University of Ottawa; Simon Fraser University; McGill University; SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Table (database); Population; Whole genome sequencing; Genetic genealogy; Genome; Missing data","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002986483,0.001236506,0.001211108,0.003071995,0.00164768,0.002147609,0.002553686,0.001388802,0.7873305],"category_scores_gemma":[0.02065752,0.0007708017,0.000762724,0.00472803,0.0004974782,0.001746159,0.00181949,0.001416685,0.1899721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002339014,"about_ca_system_score_gemma":0.005195479,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04854218,"about_ca_topic_score_gemma":0.08460183,"domain_scores_codex":[0.9988326,0.000179459,0.0001537389,0.0003539735,0.0002699992,0.0002101824],"domain_scores_gemma":[0.9903756,0.005492555,0.0005796208,0.001014258,0.001672829,0.0008652018],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001959813,0.00002566226,0.001074629,0.0008295582,0.0000204726,0.00005045034,0.00005726944,0.0002133434,0.000174803,0.0005815413,0.9911519,0.005624424],"study_design_scores_gemma":[0.001649695,0.0001361717,0.01547535,0.001478952,0.0001008484,0.0004378897,0.0003983844,0.001126172,0.001034518,0.006360163,0.971659,0.0001429965],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0001238367,0.00002184614,0.0004064207,0.0000936512,0.00003148596,0.0001006144,0.997612,0.0003493864,0.001260812],"genre_scores_gemma":[0.002574299,0.00009748305,0.003173477,0.0006513915,0.00006644725,0.000946685,0.9852632,0.001069706,0.006157213],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.9514578,"threshold_uncertainty_score":0.3033472,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1060143536835975,"score_gpt":0.3703263669172896,"score_spread":0.2643120132336921,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}