{"id":"W6920943351","doi":"10.6084/m9.figshare.19518561","title":"Additional file 7 of Predicted coronavirus Nsp5 protease cleavage sites in the human proteome","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Concordia University","funders":"","keywords":"Cleavage (geology); Coronavirus; Proteome; Protease; Severe acute respiratory syndrome coronavirus; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Escherichia coli Proteins; Coronavirus disease 2019 (COVID-19)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00125401,0.001568762,0.001488653,0.00285497,0.0009808046,0.001990007,0.002003586,0.00128453,0.8343272],"category_scores_gemma":[0.01059476,0.0006072362,0.001168969,0.004202766,0.0002759331,0.001976758,0.001183572,0.001113932,0.2788318],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009144259,"about_ca_system_score_gemma":0.001406194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004864109,"about_ca_topic_score_gemma":0.007979659,"domain_scores_codex":[0.999337,0.00007719581,0.00008934407,0.0002114232,0.0001645502,0.0001204387],"domain_scores_gemma":[0.9928765,0.004643464,0.0004779511,0.0004763461,0.001197293,0.0003284061],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003460261,0.00006894196,0.001472044,0.002130068,0.00005293222,0.00008017063,0.00003628062,0.0003046129,0.0004244528,0.0003800056,0.9882944,0.006410083],"study_design_scores_gemma":[0.003393699,0.0003050011,0.02929584,0.002497112,0.0002687919,0.0008432771,0.000349165,0.002937892,0.003431736,0.009962079,0.9465117,0.0002035372],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0001655818,0.00002477944,0.0002255668,0.00006082859,0.00002748587,0.0000214865,0.9982442,0.0006250936,0.0006049043],"genre_scores_gemma":[0.003557709,0.0001084544,0.002095158,0.0002314996,0.00005469872,0.0002181478,0.9897476,0.0009249256,0.003061814],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8343272,"threshold_uncertainty_score":0.2363122,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03541403804705125,"score_gpt":0.2467066670969603,"score_spread":0.2112926290499091,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}