{"id":"W6920955731","doi":"10.6084/m9.figshare.29510554","title":"Additional file 1 of A minimized symbiotic gene set from the 1.68 Mb pSymB chromid of Sinorhizobium meliloti reveals auxiliary symbiotic loci","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; McMaster University","funders":"","keywords":"Sinorhizobium meliloti; Gene; Table (database); Set (abstract data type); Sinorhizobium; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007627012,0.001553796,0.001997685,0.002170325,0.00152234,0.001381798,0.002412481,0.00113542,0.7068807],"category_scores_gemma":[0.005167413,0.0009492791,0.001072273,0.003494132,0.0003428024,0.001472056,0.00109332,0.001543697,0.1535278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009560402,"about_ca_system_score_gemma":0.001486659,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005569775,"about_ca_topic_score_gemma":0.01164136,"domain_scores_codex":[0.9995994,0.00003523866,0.00004138751,0.0001448929,0.0001071382,0.00007197419],"domain_scores_gemma":[0.9970079,0.001995991,0.0001964141,0.0002654593,0.0003241167,0.000210036],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001136536,0.0002340963,0.003583997,0.006078065,0.000138759,0.0002952444,0.0001889618,0.0009279678,0.00779778,0.001434184,0.9642294,0.01395499],"study_design_scores_gemma":[0.006507403,0.0006855567,0.06629904,0.002099548,0.0004263188,0.001445403,0.0004878483,0.004345376,0.01615063,0.00865933,0.892539,0.0003545973],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0003632173,0.00002221659,0.0005258475,0.00003329043,0.00002404231,0.00002602014,0.9974276,0.0009327436,0.0006449765],"genre_scores_gemma":[0.004303755,0.00006354726,0.003088304,0.0001310812,0.00003228611,0.0002495383,0.988512,0.001495838,0.002123558],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.7068807,"threshold_uncertainty_score":0.4180991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02056260909512408,"score_gpt":0.2152186489836202,"score_spread":0.1946560398884961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}