{"id":"W6921001050","doi":"10.6084/m9.figshare.28106316","title":"Additional file 1 of A single-plasmid-based, easily curable CRISPR/Cas9 system for rapid, iterative genome editing in Pseudomonas putida KT2440","year":2024,"lang":"en","type":"article","venue":"Open MIND","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Pseudomonas putida; Genome editing; Genome; CRISPR; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00199691,0.001474598,0.002199807,0.003490934,0.001373812,0.001836672,0.003473235,0.0020573,0.8013196],"category_scores_gemma":[0.01060518,0.001672794,0.001090678,0.003793127,0.0004797541,0.001563129,0.001371879,0.002188161,0.2264452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001490829,"about_ca_system_score_gemma":0.002904677,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004276291,"about_ca_topic_score_gemma":0.01032693,"domain_scores_codex":[0.9990489,0.0001096426,0.0001320995,0.0002550725,0.0003098773,0.0001444038],"domain_scores_gemma":[0.9914072,0.006115479,0.0004485136,0.0006936265,0.0007775155,0.0005577093],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008571324,0.0005743431,0.001265788,0.005713455,0.00009577321,0.0002908356,0.0001265687,0.001504986,0.008983078,0.002969203,0.9525003,0.0251185],"study_design_scores_gemma":[0.004985726,0.000787619,0.01674407,0.001749499,0.000307617,0.001237139,0.0002517171,0.007688235,0.03591279,0.0176166,0.9122251,0.0004939217],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.000340605,0.00004631572,0.003778831,0.00008499824,0.00006859704,0.000155924,0.9904113,0.003374583,0.00173872],"genre_scores_gemma":[0.00752819,0.0001923865,0.01904393,0.0004100806,0.0000622038,0.00184227,0.9576403,0.00408167,0.009199028],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8013196,"threshold_uncertainty_score":0.2833934,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01804269296537345,"score_gpt":0.2938508741025612,"score_spread":0.2758081811371877,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}