{"id":"W6921008745","doi":"10.6084/m9.figshare.10086296.v1","title":"Additional file 2: of Phenome-wide association analysis of LDL-cholesterol lowering genetic variants in PCSK9","year":2019,"lang":"en","type":"article","venue":"Figshare","topic":"Lipoproteins and Cardiovascular Health","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Danish Agency for Science and Higher Education; Medical Research Council; Canadian Institutes of Health Research; Forsknings- og Innovationsstyrelsen; National Institutes of Health; Vincent Fairfax Family Foundation; Novo Nordisk Foundation Center for Basic Metabolic Research; Helsefonden; Universitair Medisch Centrum Groningen; Augustinus Fonden; Region Hovedstaden; Novo Nordisk; Hjärt-Lungfonden; Centers for Disease Control and Prevention; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Institut National de la Santé et de la Recherche Médicale; NIH Clinical Center; National Stroke Foundation; University of Oxford; European Commission; UK-India Education and Research Initiative; Sundhed og Sygdom, Det Frie Forskningsråd; National Institute of Neurological Disorders and Stroke; British Heart Foundation; Hjerteforeningen; Diabetesforeningen; Vetenskapsrådet; Pfizer; Västra Götalandsregionen; Heart and Stroke Foundation of Canada; Copenhagen Graduate School for Nanoscience and Nanotechnology; Canadian Stroke Network; Hunter Medical Research Institute; National Health and Medical Research Council; AstraZeneca; U.S. Department of Veterans Affairs; Office of Research and Development; Johns Hopkins University","keywords":"Genetic variants; PCSK9; Genetic association; Genome-wide association study; Association (psychology); Genetic variation; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002017439,0.001409107,0.001736013,0.00246254,0.001268759,0.001586485,0.002028556,0.001299423,0.8631355],"category_scores_gemma":[0.02720394,0.0007551001,0.001785585,0.004033035,0.0003035508,0.001366311,0.001094099,0.001046997,0.1132775],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008365951,"about_ca_system_score_gemma":0.001831215,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0160694,"about_ca_topic_score_gemma":0.01962782,"domain_scores_codex":[0.9991502,0.0002005315,0.0001401792,0.0002793481,0.0001163031,0.0001135128],"domain_scores_gemma":[0.9788529,0.01647109,0.0009538747,0.001127146,0.001913147,0.0006817587],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0006550603,0.0001336462,0.007481833,0.00332326,0.0002289277,0.0001848641,0.0001018637,0.0005331574,0.0001588836,0.0008220949,0.9761559,0.01022066],"study_design_scores_gemma":[0.02599532,0.0009904946,0.139039,0.009320693,0.002262968,0.002723281,0.001026725,0.005047916,0.00161323,0.02614876,0.7853664,0.0004651085],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.000361379,0.00002593761,0.00040554,0.0001193706,0.00002926407,0.000122145,0.9978049,0.0001825101,0.0009489849],"genre_scores_gemma":[0.01973743,0.0002675666,0.007849948,0.001294325,0.0002404729,0.00411463,0.9479923,0.001152774,0.01735049],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8631355,"threshold_uncertainty_score":0.1952206,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01293216952602647,"score_gpt":0.2295026056783383,"score_spread":0.2165704361523119,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}