{"id":"W6921062789","doi":"10.6084/m9.figshare.27872800","title":"Additional file 1 of HIV phylogenetic clusters point to unmet hiv prevention, testing and treatment needs among men who have sex with men in kenya","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Human immunodeficiency virus (HIV); Men who have sex with men; Population; Phylogenetic tree; Point (geometry)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001015189,0.0009742875,0.0008802556,0.002988619,0.0013435,0.001678507,0.001609267,0.001017135,0.8772005],"category_scores_gemma":[0.02575367,0.0005567682,0.0007923994,0.005347746,0.0002765094,0.001731004,0.001221812,0.0008555945,0.1529387],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009100001,"about_ca_system_score_gemma":0.001814716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02105452,"about_ca_topic_score_gemma":0.03409694,"domain_scores_codex":[0.9994422,0.0001147038,0.0000928726,0.0001334587,0.00008754896,0.0001291508],"domain_scores_gemma":[0.9842892,0.01174919,0.001013669,0.0006642272,0.001756148,0.0005274934],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001474399,0.00003769865,0.004005985,0.001829451,0.00002788726,0.00005816656,0.0001120484,0.0001851912,0.00005493079,0.0004856456,0.986636,0.00641944],"study_design_scores_gemma":[0.003405782,0.000229218,0.1167075,0.009352406,0.0003110845,0.001085355,0.00266246,0.002003422,0.0006149725,0.01369112,0.8497608,0.0001758575],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0002258501,0.00001474785,0.00009060479,0.0000807817,0.00002100002,0.00003264594,0.9985871,0.0001024006,0.0008448699],"genre_scores_gemma":[0.01243693,0.0002016236,0.003569363,0.0004407853,0.00009274542,0.0009885888,0.9735864,0.0005594342,0.008124263],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8772005,"threshold_uncertainty_score":0.1751585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01962318953665773,"score_gpt":0.2460879076336795,"score_spread":0.2264647180970218,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}