{"id":"W6921163354","doi":"10.6084/m9.figshare.26988196.v1","title":"Additional file 3 of The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Marine Sponges and Natural Products","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Phylogenetic tree; Table (database); Gene; Phylogenetics; Genome; Transcription (linguistics); Transcription factor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007904379,0.001609371,0.001996001,0.002211028,0.001366324,0.001655178,0.001601345,0.001738904,0.7121984],"category_scores_gemma":[0.006224265,0.0007365861,0.001144563,0.004113118,0.0003905655,0.001833577,0.001099437,0.001435203,0.1511295],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001058418,"about_ca_system_score_gemma":0.001782042,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005958035,"about_ca_topic_score_gemma":0.009703669,"domain_scores_codex":[0.9995105,0.0000430851,0.00006403066,0.0001586283,0.000128721,0.00009504806],"domain_scores_gemma":[0.9969818,0.001884125,0.0002624223,0.0002293813,0.0004128325,0.0002293428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.00136504,0.0001938921,0.004117751,0.009886811,0.0001249343,0.0004567852,0.0002585392,0.000738944,0.004989259,0.001031466,0.9619307,0.01490581],"study_design_scores_gemma":[0.004409418,0.000509486,0.0366826,0.002380295,0.0003355421,0.001125907,0.0005793303,0.00184022,0.006211423,0.005959006,0.9397396,0.0002272688],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0002821178,0.00003214761,0.000245065,0.0000554383,0.00002727183,0.00003980645,0.9982361,0.0005520756,0.0005300855],"genre_scores_gemma":[0.003521728,0.0001020399,0.002491472,0.0002405668,0.00003353105,0.0003642128,0.9899648,0.0007999652,0.002481704],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.7121984,"threshold_uncertainty_score":0.4105141,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.033550973486383,"score_gpt":0.251064305332541,"score_spread":0.217513331846158,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}