{"id":"W6922853043","doi":"10.1371/journal.pone.0004035.g003","title":"ML phylogram (−ln likelihood = 899.956) generated from the combined COI, EF1α, and wingless dataset using the GTR+I+G model of evolution.","year":2015,"lang":"en","type":"other","venue":"Figshare","topic":"Education Methods and Technologies","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Phylogenetic tree; Tree (set theory); Taxon; Supertree; Maximum likelihood","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003341447,0.0001843229,0.000251018,0.00006124937,0.0003429975,0.0001121437,0.0007828018,0.0003674644,0.01088071],"category_scores_gemma":[0.001518449,0.0001162668,0.00004185495,0.0003472506,0.0001856531,0.00006040786,0.000230569,0.0002639721,0.0000331414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005647672,"about_ca_system_score_gemma":0.0005544126,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004481852,"about_ca_topic_score_gemma":0.002888653,"domain_scores_codex":[0.9986611,0.0003100108,0.0001832048,0.0002784057,0.0003297046,0.0002375871],"domain_scores_gemma":[0.9985772,0.0002770933,0.0003334481,0.0005764765,0.0001760023,0.00005978529],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000001934053,0.00002493144,0.00002773454,0.0000177059,0.00003784642,2.853368e-7,0.0007266889,0.00002287266,0.00002702388,0.0002662271,0.9980437,0.0008030445],"study_design_scores_gemma":[0.0002047882,0.00001652205,0.00004310206,0.0006651561,0.00006205049,2.87537e-7,0.004582834,0.00242714,0.00003481942,0.004181166,0.9875455,0.0002366106],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0002277982,0.006892903,0.0001143802,0.0008774361,0.0002318016,0.0007221461,0.9726997,0.0002187723,0.01801507],"genre_scores_gemma":[0.01954174,0.0005915723,0.02941924,0.001208469,0.002709428,0.0005014212,0.9103001,0.0005889979,0.03513904],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.0623996,"threshold_uncertainty_score":0.9900235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1757137510097878,"score_gpt":0.3804285765429166,"score_spread":0.2047148255331288,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}