{"id":"W6926632369","doi":"10.25345/c5833n902","title":"MassIVE MSV000094868 - Investigate regulation of PNPase on global protein expression under normal and oxidative stresses","year":2024,"lang":"en","type":"dataset","venue":"UC San Diego","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Oxidative phosphorylation; Gene expression; Expression (computer science); Oxidative stress; Protein expression; Purine nucleoside phosphorylase","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002577099,0.0008238616,0.0007421676,0.0004160797,0.0001377699,0.0001596191,0.0004474388,0.0006031186,0.00105533],"category_scores_gemma":[0.0003966199,0.000720748,0.0001326284,0.0006488107,0.0006419455,0.000389252,0.0005816305,0.0006601174,0.002849986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003676902,"about_ca_system_score_gemma":0.0003202906,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000245981,"about_ca_topic_score_gemma":0.0009190144,"domain_scores_codex":[0.9962006,0.0004347089,0.0007141072,0.001109017,0.001026886,0.0005146614],"domain_scores_gemma":[0.9974571,0.0001455924,0.0008482913,0.001037072,0.0001955127,0.0003164155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005018359,0.0001826221,0.0000386139,0.0009482687,0.0001698252,0.00008107578,0.00006509261,0.0002294122,0.02180561,0.0003603249,0.9754876,0.000129718],"study_design_scores_gemma":[0.00275522,0.001429938,0.004430578,0.01630239,0.001049013,0.00003193065,0.0007136376,0.0001824489,0.2904841,0.0200094,0.6601163,0.002495115],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.07047606,0.0005056441,0.000005161222,0.0000591525,0.0002167754,0.001317337,0.9268982,0.0001329219,0.0003887282],"genre_scores_gemma":[0.03030919,0.00002707787,0.0003459401,0.00006928803,0.000255568,0.0001764187,0.968514,0.0001196481,0.0001828278],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.3153714,"threshold_uncertainty_score":0.9998578,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01931392872124815,"score_gpt":0.2779189871994115,"score_spread":0.2586050584781633,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}