{"id":"W6929654051","doi":"10.5061/dryad.k0p2ngf7w","title":"Haploid, diploid, and pooled exome capture recapitulate features of biology and paralogy in two non-model tree species","year":2021,"lang":"en","type":"dataset","venue":"DRYAD","topic":"Behavioral and Psychological Studies","field":"Psychology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; University of British Columbia","funders":"","keywords":"Exome; Genome; Exome sequencing; Population; Population genetics; Tree of life (biology); Phylogenetic tree; Allele frequency; Genomics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001705119,0.0005318638,0.001301757,0.0002166372,0.0000753339,0.00002590249,0.0002833591,0.0007897369,0.0005310071],"category_scores_gemma":[0.00003005694,0.0003941235,0.0001264856,0.0001713141,0.0006338165,0.00003355874,0.0002487098,0.0007134596,0.00003566007],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002505198,"about_ca_system_score_gemma":0.00002125542,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003570203,"about_ca_topic_score_gemma":0.01052853,"domain_scores_codex":[0.9976679,0.0002370549,0.0005328218,0.0009313217,0.0001049894,0.0005258769],"domain_scores_gemma":[0.9988379,0.0001842273,0.0002466817,0.0005694641,0.00004775376,0.000113958],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003794176,0.0005277828,0.007527079,0.00009682177,0.0002794659,0.0003395505,0.0009974005,0.000002348708,0.001688923,0.0006574508,0.9800578,0.007445904],"study_design_scores_gemma":[0.003203053,0.0005603104,0.2910042,0.0001085775,0.0003215862,0.0001150625,0.0005074672,0.00000232915,0.00002897292,0.002449319,0.7008471,0.0008520042],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.1657085,0.02159745,0.00000414674,0.000751479,0.0009139884,0.0004009745,0.8087718,0.00002617369,0.001825539],"genre_scores_gemma":[0.1014268,0.01785456,0.0002589799,0.001305153,0.0005880892,0.0002659552,0.8720248,0.00006972655,0.00620591],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.2834772,"threshold_uncertainty_score":0.999851,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08976818764168105,"score_gpt":0.3634056038938389,"score_spread":0.2736374162521579,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}