{"id":"W6929956839","doi":"10.5061/dryad.qrfj6q5f2","title":"Core genome phylogenetic tree of two Campylobacter novaezeelandiae and four unclassified thermophilic Campylobacter isolates from Canadian agricultural surface water","year":2021,"lang":"en","type":"dataset","venue":"Open MIND","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Campylobacter; Phylogenetic tree; Genome; Phylogenetics; Tree (set theory); Campylobacter jejuni; Thermophile; Campylobacter coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001113388,0.001822163,0.001957837,0.006036637,0.003330556,0.00199223,0.003286978,0.001514125,0.02612869],"category_scores_gemma":[0.003071227,0.0008285989,0.0009684238,0.01217901,0.0007973383,0.000668351,0.001449235,0.00213729,0.01556245],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.008813742,"about_ca_system_score_gemma":0.01672932,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5998273,"about_ca_topic_score_gemma":0.8036017,"domain_scores_codex":[0.9990134,0.00004427167,0.00004250838,0.0003355583,0.0002986977,0.0002655186],"domain_scores_gemma":[0.9981112,0.0003028634,0.0001791672,0.0001941497,0.000868878,0.000343766],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.00129353,0.0001951451,0.03159888,0.005117424,0.0004255948,0.0004431548,0.001372322,0.005035014,0.01094216,0.002957043,0.9037333,0.03688654],"study_design_scores_gemma":[0.0002740985,0.00004506234,0.09011561,0.0007817659,0.000244536,0.000247452,0.0007529689,0.002049552,0.002553821,0.001101799,0.9017177,0.000115738],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00332544,0.0001274992,0.0001925731,0.00003015685,0.00001056997,0.00002043483,0.9948987,0.0002697656,0.001124799],"genre_scores_gemma":[0.002560014,0.00005272774,0.0006183536,0.00001214264,0.000001481627,0.0000308997,0.9962853,0.00007420996,0.0003648944],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.4001727,"threshold_uncertainty_score":0.8050587,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05550001276129545,"score_gpt":0.2727346961355142,"score_spread":0.2172346833742188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}