{"id":"W6930269456","doi":"10.5281/zenodo.10913167","title":"Annotation files related to the Telomere-to-Telomere genome assembly of the clubroot pathogen Plasmodiophora brassicae (GCA_036867785.1)","year":2024,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Genome; Annotation; Clubroot; Genome project; Gene; Whole genome sequencing; Gene Annotation; DNA sequencing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001094024,0.003206952,0.002588155,0.004721579,0.001782809,0.002084444,0.003526358,0.002849156,0.07457353],"category_scores_gemma":[0.003084088,0.0009956587,0.001763652,0.008315044,0.0004622527,0.001532886,0.002059137,0.002624627,0.113328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001604537,"about_ca_system_score_gemma":0.002867563,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01219642,"about_ca_topic_score_gemma":0.02521234,"domain_scores_codex":[0.9988896,0.0001205663,0.0001325153,0.0004191929,0.0002641363,0.0001739327],"domain_scores_gemma":[0.9985939,0.0003894291,0.0001545856,0.000324355,0.0003398855,0.0001978738],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004299454,0.00008132545,0.001475581,0.004155984,0.0001196158,0.000157051,0.0001048952,0.0005697163,0.003704699,0.0009065976,0.9827328,0.005561889],"study_design_scores_gemma":[0.0003953537,0.00005760514,0.008152243,0.0005343835,0.0001109937,0.0002093498,0.0001219707,0.0005601375,0.00345056,0.001194865,0.9851542,0.00005819158],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0001849786,0.00006344543,0.0001343442,0.00001900013,0.00001406312,0.00001000703,0.9984207,0.0006007784,0.0005526824],"genre_scores_gemma":[0.0001651965,0.00003063733,0.0002590441,0.00001284708,0.000001260797,0.00002724348,0.9991843,0.00008871144,0.0002306813],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.07457353,"threshold_uncertainty_score":0.2494733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01434788461516671,"score_gpt":0.2448161599088702,"score_spread":0.2304682752937035,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}