{"id":"W6930895729","doi":"10.5281/zenodo.15937629","title":"griffithlab/pVACtools: 5.4.3","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Fetal and Pediatric Neurological Disorders","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre","funders":"","keywords":"Sorting; Sequence (biology); String (physics); Mechanism (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003969318,0.00525159,0.003088749,0.002643587,0.001808772,0.005352156,0.009738215,0.003887587,0.4527796],"category_scores_gemma":[0.01355316,0.004381213,0.00501451,0.001928278,0.001401303,0.005865333,0.005948325,0.006027154,0.5341294],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002482931,"about_ca_system_score_gemma":0.00235906,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005288002,"about_ca_topic_score_gemma":0.004222528,"domain_scores_codex":[0.9972276,0.0003407382,0.0002331488,0.0007046281,0.0009545846,0.000539277],"domain_scores_gemma":[0.9963026,0.00105565,0.0002154985,0.001119572,0.0009346466,0.0003720782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000327933,0.00003435032,0.0004529544,0.0006988472,0.0000848112,0.00005574017,0.0000812605,0.0002786597,0.001742344,0.0010511,0.9787952,0.01639674],"study_design_scores_gemma":[0.0003649219,0.00008234162,0.001573591,0.000354718,0.00008872246,0.000301628,0.00005682983,0.002519045,0.01672738,0.006490511,0.9711954,0.0002449703],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.0003854432,0.0003459413,0.02035648,0.0004076682,0.0005647269,0.000089487,0.03898112,0.9306366,0.008232435],"genre_scores_gemma":[0.005993525,0.0003560196,0.02064659,0.001251991,0.0001276852,0.0005041433,0.09554909,0.856955,0.01861595],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.4527796,"threshold_uncertainty_score":0.7805434,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02960267012787767,"score_gpt":0.2538870968694933,"score_spread":0.2242844267416156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}