{"id":"W6930949436","doi":"10.5281/zenodo.15447744","title":"EDGEResearch-CA/TMAtools: 0.0.9","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Visualization; Data visualization; Process (computing); Object (grammar); Work (physics)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00387367,0.003430042,0.003671377,0.003501916,0.00139255,0.00482202,0.006901982,0.001743982,0.2458659],"category_scores_gemma":[0.01278081,0.002937988,0.003113648,0.003531907,0.001279767,0.003672481,0.003758621,0.004542751,0.2853813],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001011754,"about_ca_system_score_gemma":0.003412085,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005864476,"about_ca_topic_score_gemma":0.006779162,"domain_scores_codex":[0.9977157,0.0004922712,0.0001981925,0.000773214,0.0005748228,0.0002458846],"domain_scores_gemma":[0.9953132,0.002081713,0.0004467337,0.001035598,0.0007210237,0.0004017305],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002313689,0.00002687231,0.0006641462,0.001591877,0.0003097618,0.0001094712,0.0001807431,0.001116946,0.002509708,0.006187778,0.9634497,0.02362154],"study_design_scores_gemma":[0.0003399359,0.00004705038,0.002257484,0.0003809528,0.0002914611,0.0003332847,0.00006651114,0.009104208,0.01074137,0.02322936,0.952969,0.0002393843],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.001163686,0.000942364,0.140261,0.0007110919,0.0004397127,0.0002135968,0.2887282,0.5530179,0.01452242],"genre_scores_gemma":[0.009869955,0.0008206166,0.1787913,0.001005044,0.0002109512,0.001398301,0.2029513,0.5843148,0.02063764],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.2458659,"threshold_uncertainty_score":0.8225033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02250756533830488,"score_gpt":0.2479378747513359,"score_spread":0.225430309413031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}