{"id":"W6931543100","doi":"10.5281/zenodo.6048672","title":"Fig. 1 in Emendation of the Genus Auritidibacter Yassin et al. 2011 and Auritidibacter ignavus Yassin et al. 2011 based on features observed from Canadian and Swiss clinical isolates and wholegenome sequencing analysis","year":2020,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Statistical Methods in Epidemiology","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Phylogenetic tree; Phylogenetics; Maximum parsimony; Type (biology); Genus; Tree (set theory); Clade; DNA sequencing","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002236628,0.0003042547,0.0007009225,0.0004737784,0.0003105913,0.0002143926,0.0004617222,0.000265242,0.009248049],"category_scores_gemma":[0.004976414,0.0002646006,0.00008442163,0.0003120853,0.0004192671,0.00008345342,0.000514473,0.0008175733,0.00009256679],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001288129,"about_ca_system_score_gemma":0.0000369554,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00767734,"about_ca_topic_score_gemma":0.002503444,"domain_scores_codex":[0.994477,0.003521901,0.0006451273,0.0007778771,0.0002231204,0.0003549574],"domain_scores_gemma":[0.997463,0.001142559,0.0004006346,0.000557006,0.0001373836,0.0002993955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009919113,0.00008674285,0.001316684,0.0001605812,0.0004141139,0.00002610343,0.0006744323,0.000006618933,0.0006801179,0.003624337,0.9830073,0.009903794],"study_design_scores_gemma":[0.0009935342,0.000252301,0.08392766,0.0003388756,0.0003170957,0.00001327213,0.0001438613,0.002542673,0.00003979592,0.003124597,0.9078473,0.0004590249],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.1365306,0.005339782,0.05945883,0.3660374,0.002038436,0.01255915,0.06587686,0.002580251,0.3495786],"genre_scores_gemma":[0.4862007,0.007499526,0.3384767,0.09831214,0.0008549199,0.000005170896,0.02201538,0.02119387,0.02544165],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.3496701,"threshold_uncertainty_score":0.9999806,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1475179461182689,"score_gpt":0.3609517616447676,"score_spread":0.2134338155264988,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}