{"id":"W6931775524","doi":"10.5683/sp3/tvh0ny","title":"Single-strain behavior predicts responses to environmental pH and osmolality in the gut microbiota","year":2022,"lang":"en","type":"dataset","venue":"Borealis","topic":"Transplantation: Methods and Outcomes","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Osmotic shock; Microbiome; Gut flora; Relative species abundance; Microbial population biology; In vivo; In vitro; Abundance (ecology); Osmotic pressure","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001288125,0.001349903,0.0008939535,0.001216795,0.0004586761,0.001004024,0.001434993,0.001182178,0.004440767],"category_scores_gemma":[0.003052375,0.0002471768,0.00103887,0.001305687,0.0003472028,0.000441642,0.001041662,0.0009049114,0.006006484],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007781668,"about_ca_system_score_gemma":0.0006522124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01105972,"about_ca_topic_score_gemma":0.02100805,"domain_scores_codex":[0.9992754,0.0001680711,0.00005949557,0.000280413,0.0001150352,0.0001016747],"domain_scores_gemma":[0.9991369,0.0002335716,0.0001491859,0.0002109479,0.0001719203,0.00009750678],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002647835,0.0007079267,0.3475023,0.002933008,0.001437189,0.0004831189,0.0001764679,0.01538817,0.006513142,0.001341075,0.5669483,0.05392156],"study_design_scores_gemma":[0.001186955,0.0007875743,0.536658,0.0007549379,0.0007544528,0.001581804,0.0005355809,0.03068968,0.006818862,0.004528869,0.4154736,0.0002297651],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.06566983,0.001190109,0.001362551,0.0003994705,0.0001120589,0.0000479829,0.9289302,0.0006767684,0.001611204],"genre_scores_gemma":[0.04051859,0.000223486,0.001887838,0.0001229691,0.00001797074,0.0001205689,0.9561813,0.00004457303,0.0008828092],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.01105972,"threshold_uncertainty_score":0.02199072,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04133857313268454,"score_gpt":0.3216967719376269,"score_spread":0.2803581988049424,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}