{"id":"W6939156240","doi":"10.60692/wbdjb-vgh43","title":"Early immune innate hallmarks and microbiome changes across the gut during Escherichia coli O157: H7 infection in cattle","year":2020,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"Innate immune system; Escherichia coli; Lamina propria; Immune system; Microbiome; Pathogenesis; Bacteria; TLR4; Mucin; Immunity","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001378965,0.0002166159,0.0002675899,0.0005283101,0.0002636772,0.000491581,0.0001287807,0.0004751248,0.002704286],"category_scores_gemma":[0.000146292,0.000102483,0.0001249514,0.0002875534,0.0001707054,0.0002679338,0.0002601118,0.0002733172,0.00043169],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004027464,"about_ca_system_score_gemma":0.0002230505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002414383,"about_ca_topic_score_gemma":0.003691466,"domain_scores_codex":[0.9998032,0.00002150709,0.00001613903,0.00004953898,0.00005603244,0.000053592],"domain_scores_gemma":[0.999889,0.00001211146,0.00004220013,0.00000400449,0.00002434197,0.00002837231],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001393967,0.0001589429,0.0835395,0.0008899531,0.00005370708,0.0006611432,0.0007385327,0.0001849446,0.8929079,0.0001237823,0.001104219,0.01824341],"study_design_scores_gemma":[0.00001444135,0.0006901145,0.9573078,0.0001268594,0.0000784279,0.0006673264,0.001303,0.0004820391,0.03344258,0.000129748,0.005734443,0.00002320859],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922062,0.002944822,0.0004152986,0.0001194168,0.00002594487,0.00001842429,0.003234094,0.00001633756,0.001019439],"genre_scores_gemma":[0.9909756,0.002361424,0.0006664019,0.0001263465,0.00002132358,0.00002813427,0.002803707,0.000006087388,0.003011015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002704286,"threshold_uncertainty_score":0.009046733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01869284149440572,"score_gpt":0.2329093187350579,"score_spread":0.2142164772406521,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}