{"id":"W6939384175","doi":"10.6084/m9.figshare.27019263","title":"Additional file 1 of Programming Bordetella pertussis lipid A to promote adjuvanticity","year":2024,"lang":"en","type":"article","venue":"Open MIND","topic":"History of Computing Technologies","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bordetella pertussis; Whooping cough; Pertactin; Immune system; Pertussis vaccine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001601918,0.0001102864,0.0001645016,0.0001587489,0.00008770714,0.0003252341,0.001797857,0.0000569007,0.1888846],"category_scores_gemma":[0.0005896936,0.0001025723,0.00005784066,0.0005928559,0.00006988084,0.0002817474,0.001155897,0.0001232256,0.001444389],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005125102,"about_ca_system_score_gemma":0.0002344928,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007454342,"about_ca_topic_score_gemma":0.00001195576,"domain_scores_codex":[0.9988837,0.0000233001,0.0001992162,0.0004473692,0.0002297978,0.0002166079],"domain_scores_gemma":[0.9989731,0.0003810755,0.0000534807,0.0004625271,0.00006749072,0.00006235872],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[9.579278e-7,0.00001970109,2.504327e-7,0.000006007343,0.000006267901,0.00001052327,0.0002768676,0.000003083816,0.00005106692,0.00008713799,0.4584188,0.5411193],"study_design_scores_gemma":[0.00002729319,0.000128277,0.00003510266,0.0004022726,0.00000290385,0.00001512926,0.00001681578,0.009595404,0.001067986,0.0001912201,0.9883865,0.0001311462],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"methods","genre_scores_codex":[0.02963922,0.0008359557,0.3103005,0.02655082,0.003907686,0.009774498,0.3177283,0.002064094,0.299199],"genre_scores_gemma":[0.006420367,3.151062e-7,0.9896666,0.00002992721,0.00005043118,0.0001162423,0.0004250266,0.000009833256,0.00328124],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.6793661,"threshold_uncertainty_score":0.9993331,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02822369272877785,"score_gpt":0.2813216388839564,"score_spread":0.2530979461551786,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}