{"id":"W6939404866","doi":"10.6084/m9.figshare.20175968.v1","title":"Additional file 14 of The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick; Ontario Institute for Cancer Research; Carleton University","funders":"","keywords":"Ontology; Knowledge extraction; File format; Key (lock); Flat file database","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001625849,0.001189025,0.001058702,0.003777049,0.0008533989,0.002531867,0.001927553,0.001235407,0.8335072],"category_scores_gemma":[0.01610161,0.0007714233,0.001374669,0.005468728,0.0004655803,0.00347886,0.001799717,0.001367432,0.2908099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001680832,"about_ca_system_score_gemma":0.002360643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00976216,"about_ca_topic_score_gemma":0.01272869,"domain_scores_codex":[0.9994462,0.00008333833,0.00009016223,0.0001364405,0.0001518501,0.00009185429],"domain_scores_gemma":[0.9894957,0.007307085,0.0004817509,0.0007402499,0.001616805,0.0003583944],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001438657,0.00004254405,0.0005586934,0.001151694,0.00002639132,0.00004790204,0.00007566005,0.0002546375,0.0001794653,0.001805148,0.9884906,0.007223458],"study_design_scores_gemma":[0.001004896,0.0000331712,0.003677951,0.0007836794,0.00006471064,0.0001937373,0.0002287816,0.001088747,0.001107282,0.01199134,0.9797489,0.00007674655],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0001140031,0.0000164146,0.0009859488,0.0001277435,0.00004956718,0.00005137403,0.9941298,0.001900514,0.002624632],"genre_scores_gemma":[0.003952907,0.000166247,0.009945814,0.0003787058,0.00007804421,0.0006671069,0.9700561,0.004763069,0.00999198],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.8335072,"threshold_uncertainty_score":0.2374817,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07399661812176367,"score_gpt":0.3404637760379469,"score_spread":0.2664671579161832,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}