{"id":"W6939623901","doi":"10.6084/m9.figshare.26566436","title":"Additional file 2 of 3D-GBS: a universal genotyping-by-sequencing approach for genomic selection and other high-throughput low-cost applications in species with small to medium-sized genomes","year":2024,"lang":"en","type":"other","venue":"Figshare","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Genome; Selection (genetic algorithm); Single-nucleotide polymorphism; Genomics; Human genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003215451,0.001813032,0.001902976,0.003765745,0.001550089,0.002625849,0.003846141,0.001689121,0.8883051],"category_scores_gemma":[0.02259147,0.001391363,0.001375671,0.005845739,0.0007283291,0.003014033,0.001985289,0.001947585,0.3671462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001328267,"about_ca_system_score_gemma":0.002861308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008004789,"about_ca_topic_score_gemma":0.01359319,"domain_scores_codex":[0.9986558,0.0002195125,0.0001882513,0.0003662537,0.0003637081,0.0002065152],"domain_scores_gemma":[0.9818051,0.0136709,0.0007204574,0.001223982,0.001805799,0.0007736537],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002063584,0.00008953824,0.001119632,0.001999568,0.00003439368,0.00008947396,0.00007360728,0.0005635074,0.000282605,0.001099211,0.9876863,0.006755921],"study_design_scores_gemma":[0.002978366,0.0001708247,0.01255433,0.001515024,0.0001312252,0.000458598,0.0002719117,0.001769506,0.001601888,0.01052775,0.9678224,0.0001981367],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.00009257741,0.00001337867,0.0007700048,0.00006471129,0.00002884402,0.00007003215,0.9967636,0.001072102,0.001124857],"genre_scores_gemma":[0.002875198,0.00008479674,0.005499589,0.0003647555,0.00006777279,0.0009794191,0.9795929,0.003841711,0.006693823],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8883051,"threshold_uncertainty_score":0.1593192,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02312904895802729,"score_gpt":0.1979135665342328,"score_spread":0.1747845175762055,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}