{"id":"W6939627889","doi":"10.6084/m9.figshare.20175962","title":"Additional file 12 of The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick; Ontario Institute for Cancer Research; Carleton University","funders":"","keywords":"Ontology; Knowledge extraction; File format; Key (lock); Flat file database","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001648132,0.001222627,0.00110152,0.003775569,0.0008832415,0.002540015,0.001945325,0.001312205,0.8303303],"category_scores_gemma":[0.01658587,0.0007752576,0.001424328,0.005323235,0.000467433,0.003507116,0.001817909,0.001421434,0.286136],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001631129,"about_ca_system_score_gemma":0.002342848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00920439,"about_ca_topic_score_gemma":0.01223397,"domain_scores_codex":[0.9994442,0.00008451382,0.00009179797,0.0001389801,0.0001469882,0.0000935498],"domain_scores_gemma":[0.98918,0.007571394,0.0004898853,0.0007628194,0.001607771,0.0003882739],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001623206,0.00004438555,0.0005657286,0.00129393,0.00002801129,0.00005424489,0.00007722742,0.000259146,0.0001888235,0.00177158,0.988325,0.007229663],"study_design_scores_gemma":[0.001054217,0.00003589944,0.003738449,0.0008327574,0.00006861288,0.0002084382,0.0002323219,0.001046053,0.001103825,0.011816,0.9797835,0.00007992351],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0001123095,0.00001673519,0.0009400864,0.0001328045,0.00005263714,0.00005242693,0.9944635,0.001792934,0.002436446],"genre_scores_gemma":[0.003789681,0.0001638096,0.00961402,0.0004078122,0.00008227296,0.0006868381,0.9709086,0.004569744,0.009777189],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8303303,"threshold_uncertainty_score":0.2420132,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08169920362507627,"score_gpt":0.3393248162285261,"score_spread":0.2576256126034498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}