{"id":"W6939630380","doi":"10.6084/m9.figshare.28106316.v1","title":"Additional file 1 of A single-plasmid-based, easily curable CRISPR/Cas9 system for rapid, iterative genome editing in Pseudomonas putida KT2440","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Pseudomonas putida; Genome editing; Genome; CRISPR; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001965749,0.001623424,0.002322032,0.003732094,0.001461042,0.002009382,0.00389186,0.002158666,0.8234145],"category_scores_gemma":[0.01046603,0.001916535,0.001270874,0.003803732,0.0005015439,0.001749272,0.00145752,0.002299042,0.2733393],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001525839,"about_ca_system_score_gemma":0.00266986,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003845158,"about_ca_topic_score_gemma":0.009708325,"domain_scores_codex":[0.9990587,0.0001123554,0.0001232219,0.0002595095,0.0002952874,0.0001509945],"domain_scores_gemma":[0.991319,0.006175609,0.0004073188,0.0007581065,0.00078321,0.0005566743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007076503,0.0003880954,0.0009187062,0.004591171,0.00008661804,0.0002309834,0.0001004272,0.001211873,0.006820474,0.002403689,0.9623774,0.02016296],"study_design_scores_gemma":[0.004514982,0.0006467887,0.01359105,0.001445504,0.0002863543,0.001044853,0.0002007083,0.005848515,0.02970343,0.01619607,0.9260587,0.0004630871],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0002822418,0.00004539233,0.003484728,0.00008739068,0.00007140316,0.0001473647,0.9899274,0.004211805,0.001742341],"genre_scores_gemma":[0.006422889,0.000184477,0.01790428,0.0004190879,0.00006350821,0.001705104,0.958716,0.005640234,0.008944242],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.1765855,"threshold_uncertainty_score":0.2518778,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01628318512911327,"score_gpt":0.2640437115405327,"score_spread":0.2477605264114195,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}