{"id":"W6941760680","doi":"10.1371/journal.pone.0266829.t003","title":"Frequencies of plasmid incompatibility (Inc) types identified using whole-genome sequence data from phenotypically resistant <i>Escherichia</i> isolates obtained from wildlife, swine manure pits, and environmental sources in southern Ontario, Canada, 2011−2013 (n = 200).","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Manure; Plasmid; Sequence (biology); Strain (injury); Sequence analysis; Bacteria","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008677474,0.001291859,0.001415581,0.003272295,0.001760128,0.001759179,0.002349703,0.001219071,0.03298658],"category_scores_gemma":[0.004737668,0.0006340898,0.0009139398,0.01050454,0.0004688806,0.0005877942,0.001098431,0.001088888,0.01609264],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005130245,"about_ca_system_score_gemma":0.01236536,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7971748,"about_ca_topic_score_gemma":0.9053909,"domain_scores_codex":[0.9991866,0.00004562601,0.00007732417,0.000252966,0.00023721,0.000200429],"domain_scores_gemma":[0.9961891,0.0008093558,0.0004252952,0.0004114583,0.001778398,0.0003865428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0001213668,0.00002084581,0.01590153,0.001975531,0.0001442903,0.00006208016,0.0001500385,0.0004240364,0.000371941,0.0005520668,0.9764924,0.00378388],"study_design_scores_gemma":[0.0003720681,0.00002063581,0.1542526,0.001400202,0.000286489,0.00009320687,0.0005461221,0.0004059978,0.000449657,0.0005855658,0.8415243,0.0000631005],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0003713233,0.00007166705,0.00001929249,0.00001882058,0.000005090887,0.00000386799,0.9990321,0.00001995657,0.000457829],"genre_scores_gemma":[0.001565721,0.000130815,0.0001545402,0.00003174176,0.000002434485,0.00004133038,0.9971853,0.00002147376,0.0008666433],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.2028252,"threshold_uncertainty_score":0.4080394,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03025598480973423,"score_gpt":0.2042024723509425,"score_spread":0.1739464875412082,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}