{"id":"W6945049892","doi":"10.24433/co.1327077.v2","title":"CoBE_SMuRF (Significantly Mutated Region Finder example)","year":2022,"lang":"en","type":"other","venue":"Code Ocean","topic":"Subterranean biodiversity and taxonomy","field":"Earth and Planetary Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network","funders":"","keywords":"Code (set theory); Key (lock); Source code; Identification (biology); Capsule","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001098736,0.0002544438,0.0002658118,0.0002239546,0.0002054351,0.00005066731,0.0004590025,0.0001887609,0.2715184],"category_scores_gemma":[0.000008818231,0.0002480675,0.0001019882,0.0002079284,0.000123065,0.00005092945,0.00003381922,0.0003127856,0.001740745],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001092364,"about_ca_system_score_gemma":0.00006955455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004993968,"about_ca_topic_score_gemma":0.004074764,"domain_scores_codex":[0.9986596,0.0001115855,0.0001448744,0.0004851237,0.0002677121,0.0003311381],"domain_scores_gemma":[0.9992475,0.00006570249,0.0001601427,0.0003717667,0.00001092752,0.0001439538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002708035,0.00001133458,0.08156054,0.00002458351,0.00005144162,0.0002195454,0.0001099083,0.00002821966,8.496929e-8,0.00001056291,0.9145557,0.003400972],"study_design_scores_gemma":[0.000331357,0.000067416,0.008493979,0.00001746292,0.00004025865,0.00002654718,0.0002747415,0.0001105091,0.00000171387,0.00005278961,0.9902368,0.0003463908],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.00251386,0.0007533962,0.00005504083,0.0001067598,0.0008633421,0.0003539865,0.0009214225,0.0003676853,0.9940645],"genre_scores_gemma":[0.07496766,0.0002177212,0.0003002843,0.001055381,0.0004509157,8.627691e-7,0.005229848,0.0000974684,0.9176798],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.2697777,"threshold_uncertainty_score":0.9999971,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06579922354748385,"score_gpt":0.1940309713678977,"score_spread":0.1282317478204139,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}