{"id":"W6945926192","doi":"10.25345/c5sx64m99","title":"MassIVE MSV000094500 - Immunoprecipitation and LC-MS/MS to identify protein partners of the Brain tumor (BRAT) RNA-binding protein during the Drosophila maternal-to-zygotic transition","year":2024,"lang":"en","type":"dataset","venue":"UC San Diego","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Immunoprecipitation; Transition (genetics); Drosophila (subgenus); Drosophila melanogaster; Protein–protein interaction; Brain tumor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001398706,0.001045034,0.0009230603,0.0009094409,0.0006059064,0.0008327747,0.001479018,0.0003532814,0.0005892688],"category_scores_gemma":[0.0005036921,0.0007522887,0.0003728177,0.001496271,0.0003546345,0.000458951,0.0006490916,0.001264911,0.004239844],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006359263,"about_ca_system_score_gemma":0.0002265015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005798155,"about_ca_topic_score_gemma":0.001074057,"domain_scores_codex":[0.9938651,0.0009375342,0.001327018,0.001359662,0.001541358,0.0009693195],"domain_scores_gemma":[0.9967816,0.0001701633,0.0008783078,0.001700362,0.0001937389,0.0002758374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004188909,0.00007928143,0.00001364312,0.001968283,0.0003125068,0.0001327565,0.001851761,0.0002315014,0.6013097,0.00005353921,0.3935807,0.00004739735],"study_design_scores_gemma":[0.00477279,0.001346814,0.02504247,0.03628882,0.002270219,0.0004352935,0.003914149,0.0002334345,0.7553614,0.003816282,0.1612827,0.005235668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.519014,0.0001011829,0.000004449111,0.0007920287,0.0003427628,0.005787559,0.4738205,0.0001006386,0.00003689281],"genre_scores_gemma":[0.7033371,0.000009351416,0.0002011883,0.0003313364,0.0007759291,0.00480515,0.2885074,0.000643373,0.001389102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2322981,"threshold_uncertainty_score":0.9994928,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01263884085179813,"score_gpt":0.2848132805983448,"score_spread":0.2721744397465466,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}