{"id":"W6958135198","doi":"10.6084/m9.figshare.12850481.v1","title":"Faecal microbiota signatures of IBD and their relation to diagnosis, disease phenotype, inflammation, treatment escalation and anti-TNF response in a European Multicentre Study (IBD-Character)","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Dysbiosis; Ulcerative colitis; Inflammatory bowel disease; Gut flora; Disease; Firmicutes; Biomarker; Prospective cohort study; Eubacterium","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00132809,0.0004976305,0.0005286842,0.0009430422,0.0005656597,0.0007308613,0.0003588799,0.0008145952,0.0008066868],"category_scores_gemma":[0.002585521,0.0003806632,0.000490253,0.001093154,0.0003469334,0.0003922251,0.0006398159,0.0003678172,0.0002131727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003296231,"about_ca_system_score_gemma":0.0002105489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002513466,"about_ca_topic_score_gemma":0.002373308,"domain_scores_codex":[0.9989266,0.0004344376,0.0001062699,0.0003124041,0.0001147019,0.00010562],"domain_scores_gemma":[0.998363,0.0002243606,0.0007011479,0.0002521385,0.0001667761,0.0002926359],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008947362,0.0001026232,0.9952975,0.00001732094,0.00009329208,0.0001810937,0.0001526059,0.00003550027,0.001825825,0.00001194115,0.00005074162,0.001336748],"study_design_scores_gemma":[0.00002035807,0.0002827904,0.9990634,0.0000030192,0.00002696384,0.0003277343,0.00005477485,0.0000519645,0.00007267848,0.00000609808,0.0000875667,0.000002568052],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.9995,0.0001870027,0.00008406901,0.00001066475,0.000001960361,0.000009215568,0.0001143007,0.000001938683,0.00009073866],"genre_scores_gemma":[0.9991364,0.00007040247,0.0003213084,0.00002475933,0.000007281591,0.0000128353,0.0002965002,0.000002425571,0.0001281732],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.002513466,"threshold_uncertainty_score":0.007023752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01798182767308805,"score_gpt":0.2503883650658901,"score_spread":0.232406537392802,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}