{"id":"W6958258467","doi":"10.6084/m9.figshare.20484267","title":"Additional file 4 of Mitochondrial genome sequencing, mapping, and assembly benchmarking for Culicoides species (Diptera: Ceratopogonidae)","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency; University of Toronto; University of Guelph","funders":"","keywords":"Mitochondrial DNA; Culicoides; Heteroplasmy; Haplotype; Genome; Phylogenetic tree; Position (finance); Phylogenetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001896096,0.001390408,0.001466264,0.003045143,0.001437271,0.001817758,0.002660332,0.001462525,0.8403479],"category_scores_gemma":[0.01473941,0.0008031735,0.001121312,0.004609924,0.0004022202,0.002043292,0.00135629,0.001354544,0.2484132],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009145134,"about_ca_system_score_gemma":0.001583021,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006768299,"about_ca_topic_score_gemma":0.0151624,"domain_scores_codex":[0.9991842,0.0001177129,0.0001134944,0.0002782094,0.0001668149,0.0001395946],"domain_scores_gemma":[0.9909762,0.005921252,0.0005548845,0.000802042,0.001335951,0.0004096813],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002739415,0.000082187,0.003050758,0.002622075,0.00006127531,0.00009898953,0.0001180717,0.0005597423,0.0006775767,0.0005710989,0.9840739,0.00781046],"study_design_scores_gemma":[0.002837741,0.0002874562,0.03272207,0.002159128,0.0002559018,0.0007262632,0.0004930763,0.003265033,0.003184205,0.007817505,0.9460374,0.0002143004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0002214164,0.00001538572,0.0004578996,0.00004113743,0.00002915993,0.00003582183,0.9978555,0.0007902969,0.0005534591],"genre_scores_gemma":[0.004056267,0.00005300139,0.004586598,0.0002540154,0.00004986695,0.000446135,0.9858115,0.001657686,0.003084923],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8403479,"threshold_uncertainty_score":0.2277243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0358225987598209,"score_gpt":0.2351682610400881,"score_spread":0.1993456622802672,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}