{"id":"W6958276021","doi":"10.60692/thks3-pn406","title":"Additional file 4 of Single-cell transcriptomics highlights immunological dysregulations of monocytes in the pathobiology of COPD","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Transcriptome; COPD; Gene expression; Immune system; Gene; Monocyte; Cell","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001311241,0.0001065229,0.000205717,0.0001377658,0.00003326898,0.000007636246,0.0001957861,0.000169436,0.001594827],"category_scores_gemma":[0.00004136912,0.00007669396,0.0001077413,0.0002275872,0.0001052629,0.00001304822,0.0000220204,0.00004832112,0.00002140048],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001118592,"about_ca_system_score_gemma":0.00003889198,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005752979,"about_ca_topic_score_gemma":0.000001369899,"domain_scores_codex":[0.9989637,0.00008691067,0.0006053419,0.00009728688,0.0001166957,0.0001300763],"domain_scores_gemma":[0.999281,0.00005959125,0.0002903542,0.0002214902,0.0001316193,0.00001587709],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002625944,0.0005168004,0.03842175,0.004267184,0.0006266526,0.00001147207,0.1043745,0.00511352,0.5348901,0.002997077,0.3033402,0.002814755],"study_design_scores_gemma":[0.005920494,0.002320441,0.255539,0.0009927278,0.000120802,0.00007740517,0.02875442,0.004475475,0.6067317,0.00003780855,0.09400593,0.00102385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8802834,0.00001170866,0.0006546972,0.00002110069,0.0001023287,0.0002740774,0.116823,0.00002025278,0.001809485],"genre_scores_gemma":[0.9819551,0.000001182256,0.0003034695,0.00002082759,0.00002250682,0.00007263559,0.01755154,0.000005234323,0.00006750308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2171172,"threshold_uncertainty_score":0.9993178,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02827388316357384,"score_gpt":0.1907784139491214,"score_spread":0.1625045307855476,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}