{"id":"W6958293122","doi":"10.6084/m9.figshare.24425621.v1","title":"Additional file 1 of Genome-wide allele frequency studies in Pacific oyster families identify candidate genes for tolerance to ostreid herpesvirus 1 (OsHV-1)","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Island University","funders":"","keywords":"Candidate gene; Allele frequency; Oyster; Allele; Gene; Haplotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001359649,0.0009230372,0.001166168,0.002696026,0.001134048,0.001223406,0.001907327,0.0009941435,0.8284595],"category_scores_gemma":[0.02209724,0.0005550177,0.0007855002,0.004493712,0.0002612934,0.001256112,0.0009416514,0.0007708383,0.1039068],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000859188,"about_ca_system_score_gemma":0.001353532,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01438821,"about_ca_topic_score_gemma":0.02326831,"domain_scores_codex":[0.9994243,0.00009336122,0.0001107319,0.0001696443,0.000109231,0.00009277021],"domain_scores_gemma":[0.9813132,0.01430997,0.001235322,0.001005499,0.001568844,0.0005671629],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000410122,0.0001721605,0.00950118,0.003188908,0.00009659916,0.0001856152,0.0001651315,0.0005821505,0.0003272966,0.0007305783,0.973519,0.01112114],"study_design_scores_gemma":[0.01012322,0.000715061,0.1817245,0.005106213,0.0005480526,0.001909709,0.001160666,0.003419198,0.001816797,0.01197001,0.7812038,0.00030281],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0003458211,0.000009390659,0.0001857512,0.0000433527,0.000009534685,0.00003949594,0.9988288,0.0001347824,0.0004029943],"genre_scores_gemma":[0.01290833,0.0001036997,0.003212232,0.0002997187,0.00006949598,0.001308126,0.9751532,0.0004781874,0.006466968],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8284595,"threshold_uncertainty_score":0.2446817,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04291906126445592,"score_gpt":0.2903113695867478,"score_spread":0.2473923083222919,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}