{"id":"W6958518488","doi":"10.6084/m9.figshare.21510508.v1","title":"Additional file 11 of Methylome and transcriptome data integration reveals potential roles of DNA methylation and candidate biomarkers of cow Streptococcus uberis subclinical mastitis","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Global Political and Economic Relations","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Université Laval; McGill University; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA methylation; Transcriptome; Streptococcus uberis; Gene; Methylation; DNA; Reprogramming; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002430245,0.0001365869,0.0004058159,0.0001249641,0.0001337302,0.00002721111,0.0002890243,0.0002291746,0.9367188],"category_scores_gemma":[0.003660535,0.0001406372,0.00008343381,0.000158074,0.0001772753,0.0002544321,0.0001924544,0.0001580047,0.0000136045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003633883,"about_ca_system_score_gemma":0.0002350237,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001849013,"about_ca_topic_score_gemma":0.005125935,"domain_scores_codex":[0.9983431,0.0002539992,0.0006315496,0.000321707,0.0002825324,0.0001670813],"domain_scores_gemma":[0.9977071,0.001259702,0.000521632,0.0002797405,0.0001151248,0.0001167362],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001262161,0.00003063999,0.000004718928,0.0001407349,0.00007553634,0.000001383144,0.00006161941,0.000002061248,0.00001328128,0.00005177607,0.9990665,0.0005391704],"study_design_scores_gemma":[0.0001701029,0.00004883928,0.002593525,0.0004937727,0.00008918683,0.000001143366,0.0004060439,0.00005531963,0.000006997346,0.0005129812,0.9954906,0.0001314625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.0001402874,0.000127843,7.431532e-7,0.0001050417,0.00005504747,0.0002937321,0.9990759,0.000006341725,0.0001949847],"genre_scores_gemma":[0.001722599,0.00006320859,0.0000774619,0.00001622856,0.0000677057,0.0001075289,0.9978684,0.000005996664,0.00007083478],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.9367052,"threshold_uncertainty_score":0.5735019,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05034164310606808,"score_gpt":0.3159109545169322,"score_spread":0.2655693114108641,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}