{"id":"W6958540546","doi":"10.6084/m9.figshare.c.7046442","title":"Long-insert sequence capture detects high copy numbers in a defence-related beta-glucosidase gene βglu-1 with large variations in white spruce but not Norway spruce","year":2024,"lang":"en","type":"other","venue":"Figshare","topic":"Soybean genetics and cultivation","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency; Université Laval; University of British Columbia; University of Alberta","funders":"","keywords":"Gene; Copy-number variation; Sequence (biology); Transcriptome; White (mutation); Picea abies; Gene dosage","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002831139,0.0002969211,0.0002637247,0.0005867098,0.0002681799,0.0003555922,0.0002101688,0.0002631176,0.000942093],"category_scores_gemma":[0.0004918027,0.0001845963,0.000312186,0.0005961859,0.0002416704,0.0001178078,0.0002921676,0.0002904199,0.0002625471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002410893,"about_ca_system_score_gemma":0.0001481972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002885138,"about_ca_topic_score_gemma":0.009047134,"domain_scores_codex":[0.999683,0.00002930137,0.000014291,0.0001697329,0.00006535305,0.00003836584],"domain_scores_gemma":[0.999716,0.0000962386,0.00007706213,0.00003982948,0.00003725742,0.00003347977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001316289,0.00002557964,0.02880588,0.00005680288,0.00006493456,0.00009666505,0.0002660944,0.0003302866,0.9638973,0.00007324988,0.00008777824,0.006163632],"study_design_scores_gemma":[0.0000185514,0.0002172302,0.8869393,0.00002063001,0.000134933,0.0005121669,0.0002391531,0.003865977,0.1030568,0.00009853051,0.004881425,0.00001532469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.9910412,0.0001837119,0.005264858,0.00001437404,0.00000606482,0.00002281525,0.002629155,0.0001305845,0.0007072799],"genre_scores_gemma":[0.9793671,0.0001187502,0.00977669,0.00006334137,0.000005856888,0.00007013712,0.009239247,0.00007805572,0.001280901],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.002885138,"threshold_uncertainty_score":0.005736768,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02118232930157209,"score_gpt":0.2227178399684588,"score_spread":0.2015355106668867,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}