{"id":"W6958990663","doi":"10.6084/m9.figshare.29649320.v1","title":"Detection and Characterization of Microbial Pathogens and Antimicrobial Resistance Genes in Freshwater Lakes in Ontario, Canada","year":2025,"lang":"en","type":"article","venue":"Figshare","topic":"Pharmaceutical and Antibiotic Environmental Impacts","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Antibiotic resistance; Pathogen; Antimicrobial; Resistance (ecology); Metagenomics; Microbial genetics; Acquired resistance; Human pathogen","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002068808,0.000306983,0.0002715502,0.00153024,0.002269563,0.001055597,0.0004048952,0.00026378,0.0009988091],"category_scores_gemma":[0.0005383683,0.0001983491,0.0001982133,0.002475504,0.0005963069,0.0002261394,0.0006201897,0.0001777836,0.0001727471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00836986,"about_ca_system_score_gemma":0.01293514,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9669102,"about_ca_topic_score_gemma":0.9888081,"domain_scores_codex":[0.9994195,0.00002141649,0.00002603066,0.00008380329,0.0002746562,0.0001747052],"domain_scores_gemma":[0.999404,0.00002660981,0.0001083312,0.000009547128,0.000352835,0.00009873855],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001714794,0.00004574971,0.9261372,0.0002061793,0.00003738422,0.000567493,0.003973197,0.0002177839,0.04899449,0.0001719385,0.001104966,0.01837215],"study_design_scores_gemma":[0.000003819356,0.0000343366,0.9921773,0.00002124747,0.00001182206,0.00009476046,0.002876737,0.0001613734,0.001651185,0.00001390239,0.002944477,0.000008944083],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993251,0.0005431881,0.00031438,0.0001325855,0.000005253605,0.0000711965,0.002237538,0.00001578947,0.003429139],"genre_scores_gemma":[0.9924266,0.0005924097,0.001152619,0.0001500863,0.000004410134,0.00003580987,0.001714082,0.000007740396,0.003916257],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03308982,"threshold_uncertainty_score":0.06656933,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01197070478140425,"score_gpt":0.2038348567111435,"score_spread":0.1918641519297393,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}