{"id":"W6959225456","doi":"10.6084/m9.figshare.26113074","title":"Additional file 2 of The cacao gene atlas: a transcriptome developmental atlas reveals highly tissue-specific and dynamically-regulated gene networks in Theobroma cacao L","year":2024,"lang":"en","type":"dataset","venue":"Figshare","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Theobroma; Transcriptome; Gene; Atlas (anatomy); Genomics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007468079,0.002074167,0.002165523,0.003807716,0.0009930913,0.002160645,0.002657062,0.002159174,0.2826092],"category_scores_gemma":[0.004234942,0.0007800478,0.001508181,0.006799164,0.000472559,0.001268094,0.001502065,0.001355531,0.08309771],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001691628,"about_ca_system_score_gemma":0.002767387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.023217,"about_ca_topic_score_gemma":0.03965503,"domain_scores_codex":[0.9994504,0.00004978203,0.00005951757,0.0002246204,0.0001076144,0.000108038],"domain_scores_gemma":[0.9980129,0.001011196,0.0002040759,0.0002593432,0.0003082468,0.0002042741],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002782641,0.00006874606,0.002869091,0.004845183,0.0001701592,0.0001084167,0.0001197268,0.001024437,0.001123697,0.001001907,0.9846236,0.003766722],"study_design_scores_gemma":[0.001800485,0.00008217682,0.02437527,0.001062489,0.000306542,0.0002605566,0.00019945,0.001171159,0.001537178,0.003831456,0.9652529,0.0001203905],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00007348927,0.00001726106,0.00002556269,0.00001279786,0.000003647114,0.000004827868,0.9996288,0.0001075125,0.0001260077],"genre_scores_gemma":[0.0007052187,0.00004933451,0.0002912221,0.00004864174,0.000004567279,0.0001100787,0.9982581,0.00009399594,0.0004389897],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.2826092,"threshold_uncertainty_score":0.9454219,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01543935017064747,"score_gpt":0.1994798631332332,"score_spread":0.1840405129625858,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}