{"id":"W6960038705","doi":"10.1371/journal.pone.0017293.g001","title":"Genome analysis.","year":2015,"lang":"en","type":"other","venue":"Figshare","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Genome; Phylogenetic tree; Influenza A virus subtype H5N1; Robustness (evolution); Virus; Tree (set theory); Phylogenetics; Reference genome","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00001670769,0.0001193819,0.0002018258,0.00002008537,0.00002404022,0.00002471053,0.0002176302,0.0001787947,0.7778968],"category_scores_gemma":[0.00003370151,0.00003642027,0.0001072313,0.0004190681,0.000002289697,0.000008478315,0.00004560625,0.00006402056,0.005727095],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008641268,"about_ca_system_score_gemma":0.00000663766,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001957849,"about_ca_topic_score_gemma":0.002144513,"domain_scores_codex":[0.9994253,0.0000162348,0.00006666918,0.0002072571,0.0001403599,0.0001441935],"domain_scores_gemma":[0.9997382,0.00001627167,0.000086121,0.0000503442,0.00002504876,0.00008403201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[6.007901e-7,0.000005860718,0.000003726298,0.00001030519,0.00006477191,0.00001687219,6.225814e-7,3.851657e-7,0.0009087416,2.780723e-7,0.9986568,0.0003310427],"study_design_scores_gemma":[0.00001153376,0.000008776713,0.006112604,0.0001026541,0.00003302349,9.310273e-7,0.000002614033,0.000001532722,0.00000178383,0.000001762838,0.9935849,0.0001378955],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.00000960573,0.001672079,3.296196e-9,0.00001066487,0.00001148771,0.00004796455,0.5651131,0.00007352811,0.4330616],"genre_scores_gemma":[0.00009902386,0.000009199929,0.000004211298,0.00003348329,0.0003128936,0.00001164348,0.45469,0.000002630223,0.5448369],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.7721697,"threshold_uncertainty_score":0.995047,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03791071948414446,"score_gpt":0.2140480826175186,"score_spread":0.1761373631333741,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}