{"id":"W6960404674","doi":"10.1371/journal.pntd.0011876.g005","title":"Maximum likelihood phylogenetic tree constructed using concatenated sequences of &lt;i&gt;cob1&lt;/i&gt; (603 bp), &lt;i&gt;nad2&lt;/i&gt; (882 bp) and &lt;i&gt;cox1&lt;/i&gt; (789 bp), showing relationships between the examined Slovak isolates with completely recorded sequences for three genes and GenBank-related isolates of &lt;i&gt;Echinococcus multilocularis&lt;/i&gt;.","year":2024,"lang":"en","type":"other","venue":"Figshare","topic":"Potato Plant Research","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Sensu; Phylogenetic tree; Slovak; Tree (set theory); Scale (ratio); Central asia","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","scholarly_communication","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.002253757,0.003565503,0.004508413,0.001240131,0.002070748,0.001196228,0.003743956,0.003382536,0.008473009],"category_scores_gemma":[0.001949925,0.00206101,0.00117751,0.003878072,0.002515587,0.0009393045,0.001603077,0.002164242,0.0002538022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004713203,"about_ca_system_score_gemma":0.0009163443,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002901102,"about_ca_topic_score_gemma":0.01533596,"domain_scores_codex":[0.9832137,0.002069905,0.003983074,0.004457963,0.002515541,0.003759823],"domain_scores_gemma":[0.9857237,0.005987278,0.003566159,0.001527635,0.001836626,0.001358592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000543909,0.0003042865,0.002568055,0.00189789,0.002781794,0.0002003526,0.0007292927,0.0001442962,0.9468478,0.000472453,0.02625422,0.01725567],"study_design_scores_gemma":[0.01543423,0.009373814,0.1193844,0.03783908,0.008018057,0.002186325,0.000828918,0.04864781,0.04380811,0.01125739,0.6852666,0.01795524],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6860584,0.1103852,0.00006843553,0.000904217,0.0007997912,0.01123198,0.1787092,0.001476998,0.01036581],"genre_scores_gemma":[0.9349956,0.002906622,0.003547981,0.0001318342,0.001133098,0.001067643,0.04997621,0.0005728112,0.005668191],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9030397,"threshold_uncertainty_score":0.9998406,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06055475312239081,"score_gpt":0.2534394198431451,"score_spread":0.1928846667207543,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}