{"id":"W6960591135","doi":"10.1371/journal.pone.0284393.s001","title":"Strains of <i>Neonectria</i> sp. nov., <i>Ophiostoma quercus</i>, <i>Ophiostoma</i> sp. nov., and <i>Cadophora spadicis</i> isolated from <i>Alniphagus aspericollis</i> and gallery phloem, including their collection site(s) and GenBank accession numbers for barcode sequences (internal transcribed spacer (ITS) rDNA gene region, partial beta-tubulin (BT) gene, partial translation elongation factor 1-alpha (EF1-α) gene, and partial RNA polymerase II second largest subunit (RPB2) gene).","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Sesame and Sesamin Research","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"GenBank; Accession number (library science); Barcode; DNA barcoding; Accession","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","scholarly_communication","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.002080428,0.003288662,0.003543558,0.001280805,0.004902802,0.001709573,0.001947598,0.002763211,0.008355352],"category_scores_gemma":[0.001116329,0.002474635,0.001341119,0.004198099,0.001021102,0.003127742,0.0009791959,0.001535209,0.0001703412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008024239,"about_ca_system_score_gemma":0.001058016,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002809586,"about_ca_topic_score_gemma":0.01617138,"domain_scores_codex":[0.9816483,0.002008215,0.004044996,0.005046119,0.003123472,0.004128861],"domain_scores_gemma":[0.9896697,0.002623219,0.00228481,0.001229295,0.001688297,0.002504695],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003570769,0.0009314995,0.0006413987,0.0004977467,0.00105703,0.0004345997,0.003663026,0.0003355122,0.9660062,0.0001805291,0.0120386,0.01064309],"study_design_scores_gemma":[0.01815067,0.006644235,0.1217321,0.002676998,0.001763623,0.000876088,0.0004358092,0.06980149,0.63102,0.0003983032,0.138495,0.008005738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9034012,0.0245644,0.0002428939,0.001787259,0.001042752,0.005501442,0.06227839,0.0008046878,0.0003769663],"genre_scores_gemma":[0.9530228,0.007096257,0.0005193052,0.0003707222,0.002789894,0.001081371,0.03335136,0.0002624312,0.001505897],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3349862,"threshold_uncertainty_score":0.9993268,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06296973622348805,"score_gpt":0.2736331522194307,"score_spread":0.2106634159959427,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}